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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889473.1_cds_XP_016444195.1_39278
CDS Infomation

[gene=LOC107769487] [db_xref=GeneID:107769487] [protein=putative pectinesterase 11] [protein_id=XP_016444195.1] [location=complement(join(29203..29419,29954..30189,30336..30524,31341..31724))] [gbkey=CDS]
Sequence

ATGGCTTTTCACGGGTACATTGTGATAGTGGTTATATTAGCTATGAGTTATTTACTGATT
TGTTCGGAAGCTGATTCAAGTACTCAATTATCATCTGCAATTTTGATAAAAGTGGATCAA
TCTGGAAAAGGAGATTACAAGAAAATACAAGACGCAATTGACGCAGTGCCTTCACATAAT
TCGCAACATATATTTATTTCGGTTAAGCCTGGTATTTACAGAGAAAAAATTGTTGTTCCT
GCGGATAAGCCATTTATAACAATCAGTGGTAGAAAACCAGTAAACAACACAATAATCACA
GGGAATAGTTTTGGAGATATATTTAAATCCTCTACTTTCACCGTTTTTGCCTCTGATTTC
GTGGCTCGGCACCTTACAATTCAGAACACATATGGAACTGGAGCTAAAGCAGTAGCATTG
AGAGTAGAAGGAGATAGAGTTGGCTTCGTGGGTTGTAGAATTAAGTCACATCAGGATACA
TTACTTGATGATGTTGGGAGGCATTACTACAAAAATTGTTATATCGAAGGGGACACTGAC
TTCATATGTGGAAATGGCGCTTCTCTCTTTGAGAAATGCCATTTGCATTCACTTTCACAA
GGAAATGGGGCTATAACAGCACAACATAGGCAATCATCTCAGGAAAATACAGGTTTCACC
TTTGTTGGATGCAAGATTACTGGAGTGAAGAGTGCAATTCTTGGTAGACCATGGGGTCCC
TATGCAAGGGTAATCTTTGCCCAAACTTACATGTCAAGTGTCATACTCCCCTACGGTTGG
GAAGATTGGAATGTCCCCTCCCGGCAAAGGACATCATATTTTGCAGAGTACAAGTGTTAT
GGGCCAGGTGCAAGTTCTGATAAGAGGGTAAACTGGTTACGGACTTTGTCTAGTGAAGAA
GCTGTCCCTTACTTGAAGGAGAGCATTATGGACCCAAAGAGTTGGATTAGGTCCAAGCCC
ACACATTTAATTCCTTTGTCTAAAGCAATCTCCACCAGTTTCAGCAAAAAGAGAAGCAGC
CCATGA

Peptide Sequence

PEP ID

XP_016444195.1
PEP Infomation

PREDICTED: putative pectinesterase 11 [Nicotiana tabacum]
Sequence

MAFHGYIVIVVILAMSYLLICSEADSSTQLSSAILIKVDQSGKGDYKKIQDAIDAVPSHN
SQHIFISVKPGIYREKIVVPADKPFITISGRKPVNNTIITGNSFGDIFKSSTFTVFASDF
VARHLTIQNTYGTGAKAVALRVEGDRVGFVGCRIKSHQDTLLDDVGRHYYKNCYIEGDTD
FICGNGASLFEKCHLHSLSQGNGAITAQHRQSSQENTGFTFVGCKITGVKSAILGRPWGP
YARVIFAQTYMSSVILPYGWEDWNVPSRQRTSYFAEYKCYGPGASSDKRVNWLRTLSSEE
AVPYLKESIMDPKSWIRSKPTHLIPLSKAISTSFSKKRSSP

Transcript Sequence

Gene sequence data has not been registered.